STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS2324Aminotran_1_2 domain-containing protein. (463 aa)    
Predicted Functional Partners:
TRE_LOCUS9036
Aminotran_1_2 domain-containing protein.
   
 0.980
TRE_LOCUS11275
Uncharacterized protein.
   
 0.972
A0A183WK30
Aspartate aminotransferase.
   
 0.963
TRE_LOCUS17876
Aminotran_1_2 domain-containing protein.
   
 0.963
TRE_LOCUS14682
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
 0.958
TRE_LOCUS3228
Uncharacterized protein.
  
  
 
0.957
TRE_LOCUS20487
4Fe-4S ferredoxin-type domain-containing protein.
  
 
 0.948
A0A183VUG8
Iso_dh domain-containing protein.
  
 
 0.945
TRE_LOCUS4671
Uncharacterized protein.
    
 0.941
A0A183W270
Uncharacterized protein.
   
 
 0.940
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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