STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS3576Uncharacterized protein. (297 aa)    
Predicted Functional Partners:
A0A183VWK2
Uncharacterized protein.
 
     0.948
A0A183VMX7
C2 domain-containing protein.
 
     0.934
TRE_LOCUS3022
C2 domain-containing protein.
 
     0.918
A0A183WIE2
C2 domain-containing protein.
 
     0.916
TRE_LOCUS4782
Uncharacterized protein.
 
     0.772
TRE_LOCUS19054
V-SNARE coiled-coil homology domain-containing protein.
     
 0.551
A0A183X1P9
Uncharacterized protein.
     
 0.535
TRE_LOCUS4680
Ferlin_C domain-containing protein.
 
     0.531
A0A183W8K3
C2 domain-containing protein.
 
     0.448
TRE_LOCUS1767
Synapsin_C domain-containing protein.
     
 0.410
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.