STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS3877KH domain-containing protein. (240 aa)    
Predicted Functional Partners:
TRE_LOCUS9644
zf-C2H2_jaz domain-containing protein.
    
   0.880
TRE_LOCUS962
Uncharacterized protein.
   
 0.873
TRE_LOCUS11622
KH_dom_type_1 domain-containing protein.
   
 0.873
TRE_LOCUS141
Uncharacterized protein.
   
 0.871
TRE_LOCUS9334
Uncharacterized protein.
   
 0.871
TRE_LOCUS21645
Nuclear cap-binding protein subunit 2.
    
 0.832
TRE_LOCUS799
RRM domain-containing protein.
   
 0.824
TRE_LOCUS20868
Uncharacterized protein.
   
 0.816
TRE_LOCUS632
Uncharacterized protein.
   
 0.814
TRE_LOCUS16752
SAP domain-containing protein.
   
 0.814
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.