STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS4980XPGI domain-containing protein. (611 aa)    
Predicted Functional Partners:
TRE_LOCUS14871
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.976
TRE_LOCUS20730
General transcription factor IIH subunit.
    
 0.964
TRE_LOCUS9680
Uncharacterized protein.
    
 0.960
TRE_LOCUS13074
Uncharacterized protein.
    
 0.960
TRE_LOCUS1711
ERCC4 domain-containing protein.
   
 0.958
TRE_LOCUS9624
ERCC3_RAD25_C domain-containing protein.
   
 0.922
TRE_LOCUS9864
Helicase C-terminal domain-containing protein.
   
 0.922
TRE_LOCUS16096
Helicase_C_3 domain-containing protein.
   
 0.922
TRE_LOCUS12498
Uncharacterized protein.
   
 0.914
TRE_LOCUS14990
Helicase ATP-binding domain-containing protein.
   
 0.914
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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