STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS5162PWI domain-containing protein. (112 aa)    
Predicted Functional Partners:
TRE_LOCUS8254
Uncharacterized protein.
   
 0.996
A0A183VJJ0
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.992
A0A183X7M5
MI domain-containing protein.
    
 0.991
TRE_LOCUS13271
RRM domain-containing protein.
    
 0.990
TRE_LOCUS6576
Uncharacterized protein.
   
 0.987
TRE_LOCUS12521
RanBD1 domain-containing protein.
    
 0.987
TRE_LOCUS3491
Uncharacterized protein.
   
 0.986
TRE_LOCUS1111
Smg4_UPF3 domain-containing protein.
    
 0.984
TRE_LOCUS20078
Uncharacterized protein.
    
 0.984
TRE_LOCUS632
Uncharacterized protein.
   
 0.983
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.