STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183VYA0Uncharacterized protein. (180 aa)    
Predicted Functional Partners:
TRE_LOCUS3077
RRM domain-containing protein.
    
 0.886
TRE_LOCUS332
PWI domain-containing protein.
    
 
 0.759
TRE_LOCUS2437
Uncharacterized protein.
    
 
 0.759
A0A183WC26
Uncharacterized protein.
    
 
 0.759
TRE_LOCUS141
Uncharacterized protein.
    
 0.714
TRE_LOCUS9334
Uncharacterized protein.
    
 0.714
A0A183VHY9
Uncharacterized protein.
    
 
 0.668
TRE_LOCUS171
Uncharacterized protein.
    
 
 0.668
TRE_LOCUS18265
Uncharacterized protein.
    
 
 0.668
TRE_LOCUS11633
RRM domain-containing protein.
   
 0.660
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.