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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS5801Uncharacterized protein. (112 aa)    
Predicted Functional Partners:
TRE_LOCUS715
Uncharacterized protein.
    
 0.897
TRE_LOCUS7059
Aldedh domain-containing protein.
    
 0.897
A0A183W3T1
AA_kinase domain-containing protein.
    
 0.897
A0A183W171
AA_TRNA_LIGASE_II domain-containing protein.
    
 0.864
A0A183W8I3
Uncharacterized protein.
    
 0.864
TRE_LOCUS11436
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.864
A0A183VIN3
BH4_AAA_HYDROXYL_2 domain-containing protein.
   
 0.836
TRE_LOCUS15708
Uncharacterized protein.
     
 0.804
A0A183WC96
Cu_amine_oxid domain-containing protein.
     
 0.773
TRE_LOCUS21684
HSL_N domain-containing protein.
  
 0.768
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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