Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS5801Uncharacterized protein. (112 aa)    
Predicted Functional Partners:
A0A183VIN3
BH4_AAA_HYDROXYL_2 domain-containing protein.
   
 0.907
TRE_LOCUS15708
Uncharacterized protein.
     
 0.890
TRE_LOCUS2830
Aldedh domain-containing protein.
   
 0.875
TRE_LOCUS2930
BH4_AAA_HYDROXYL_2 domain-containing protein.
   
 0.848
TRE_LOCUS4445
BH4_AAA_HYDROXYL_2 domain-containing protein.
   
 0.848
TRE_LOCUS715
Uncharacterized protein.
    
 0.826
TRE_LOCUS7059
Aldedh domain-containing protein.
    
 0.826
A0A183W3T1
AA_kinase domain-containing protein.
    
 0.826
TRE_LOCUS7829
Uncharacterized protein.
     
 0.818
TRE_LOCUS3521
Uncharacterized protein.
   
 
 0.811
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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