STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS7032ENDO3c domain-containing protein. (249 aa)    
Predicted Functional Partners:
A0A183WWZ6
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
  
 0.981
A0A183VMT6
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
   
 0.954
TRE_LOCUS6134
Endo/exonuclease/phosphatase domain-containing protein.
  
 0.951
TRE_LOCUS11304
ENDO3c domain-containing protein.
  
 
 0.918
A0A183WK71
Uncharacterized protein.
  
 
 0.918
TRE_LOCUS1266
Uncharacterized protein.
  
 0.857
A0A183VJ88
C2H2-type domain-containing protein.
  
 0.857
TRE_LOCUS73
Reverse transcriptase domain-containing protein.
  
 0.857
TRE_LOCUS217
Uncharacterized protein.
  
 0.857
TRE_LOCUS468
Uncharacterized protein.
  
 0.857
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.