STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS8985tRNA-synt_2 domain-containing protein. (135 aa)    
Predicted Functional Partners:
A0A183W171
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.995
A0A183W8I3
Uncharacterized protein.
  
 0.995
TRE_LOCUS11436
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.995
TRE_LOCUS9518
GIY-YIG domain-containing protein.
   
 0.965
TRE_LOCUS1711
ERCC4 domain-containing protein.
  
 0.961
A0A183WPW1
tRNA-synt_1g domain-containing protein.
  
 0.948
A0A183WYG3
tRNA-synt_1g domain-containing protein.
  
 0.948
TRE_LOCUS12498
Uncharacterized protein.
  
 0.942
TRE_LOCUS14990
Helicase ATP-binding domain-containing protein.
  
 0.942
A0A183VIY0
GatB_N domain-containing protein.
  
 0.929
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.