STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS9338Uncharacterized protein. (460 aa)    
Predicted Functional Partners:
TRE_LOCUS4288
Focal_AT domain-containing protein.
    
 0.895
TRE_LOCUS4506
Uncharacterized protein.
    
 0.895
TRE_LOCUS5386
Uncharacterized protein.
   
 
 0.854
TRE_LOCUS6411
Uncharacterized protein.
   
 
 0.854
TRE_LOCUS21758
Uncharacterized protein.
   
 
 0.854
A0A183WIB8
Calponin-homology (CH) domain-containing protein.
   
 
 0.854
TRE_LOCUS6031
Calponin-homology (CH) domain-containing protein.
   
 0.824
TRE_LOCUS7986
Uncharacterized protein.
   
 0.824
TRE_LOCUS5280
Uncharacterized protein.
    
 0.821
A0A183W549
Uncharacterized protein.
    
 0.821
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.