STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS9403Uncharacterized protein. (296 aa)    
Predicted Functional Partners:
TRE_LOCUS19726
Ubiquitin-like domain-containing protein.
   
 0.941
TRE_LOCUS13333
Ubiquitin-like domain-containing protein.
    
  0.940
TRE_LOCUS16613
Uncharacterized protein.
    
 
 0.735
A0A183WNL3
AN1-type domain-containing protein.
   
  0.724
TRE_LOCUS17264
Ubiquitin-like domain-containing protein.
   
  0.724
TRE_LOCUS1460
Uncharacterized protein.
    
  0.700
TRE_LOCUS9582
Uncharacterized protein.
    
  0.700
TRE_LOCUS13147
Uncharacterized protein.
    
  0.700
TRE_LOCUS1269
RING-type domain-containing protein.
    
 0.699
TRE_LOCUS1658
Uncharacterized protein.
    
 0.699
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.