STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS13331Uncharacterized protein. (221 aa)    
Predicted Functional Partners:
TRE_LOCUS14552
AAA_16 domain-containing protein.
   
 0.996
TRE_LOCUS1571
Uncharacterized protein.
   
 0.995
TRE_LOCUS4167
Uncharacterized protein.
   
 0.993
TRE_LOCUS3850
MCM domain-containing protein; Belongs to the MCM family.
   
 0.992
A0A183VWX9
MCM domain-containing protein; Belongs to the MCM family.
   
 0.989
TRE_LOCUS6927
DNA helicase; Belongs to the MCM family.
   
 0.989
TRE_LOCUS7973
MCM_lid domain-containing protein.
   
 0.989
TRE_LOCUS8463
CDT1 domain-containing protein.
   
 0.989
TRE_LOCUS11974
MCM_OB domain-containing protein.
   
 0.989
A0A183X0S4
Uncharacterized protein.
   
 0.989
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.