STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS16174Uncharacterized protein. (73 aa)    
Predicted Functional Partners:
TRE_LOCUS3021
GuKc domain-containing protein.
   
 0.846
TRE_LOCUS3109
Uncharacterized protein.
   
 0.846
TRE_LOCUS9951
Uncharacterized protein.
   
 0.846
A0A183W734
Uncharacterized protein.
    
 0.713
TRE_LOCUS10076
Uncharacterized protein.
    
 0.713
A0A183WLI2
Uncharacterized protein.
    
 0.713
A0A183WWJ1
GuKc domain-containing protein.
    
 0.713
TRE_LOCUS1378
Ion_trans domain-containing protein.
   
 0.687
A0A183VLN9
Ca_chan_IQ domain-containing protein.
   
 0.687
TRE_LOCUS1488
Ion_trans domain-containing protein.
   
 0.687
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.