STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS16501CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (450 aa)    
Predicted Functional Partners:
TRE_LOCUS6645
Uncharacterized protein.
     
 0.940
TRE_LOCUS18686
Uncharacterized protein.
     
 0.940
TRE_LOCUS20005
Uncharacterized protein.
     
 0.940
TRE_LOCUS6142
Uncharacterized protein.
     
 0.934
A0A183WCC9
Uncharacterized protein.
     
 0.934
TRE_LOCUS10544
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.934
TRE_LOCUS13232
Uncharacterized protein.
     
 0.934
TRE_LOCUS5040
Uncharacterized protein.
  
  
 0.847
TRE_LOCUS16272
Uncharacterized protein.
     
 0.837
TRE_LOCUS18953
Uncharacterized protein.
     
 0.837
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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