STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS18149Uncharacterized protein. (173 aa)    
Predicted Functional Partners:
TRE_LOCUS4913
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.849
TRE_LOCUS168
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.769
TRE_LOCUS9547
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.762
TRE_LOCUS9212
Uncharacterized protein.
   
 0.750
A0A183VRE8
Uncharacterized protein.
    
 0.652
TRE_LOCUS1165
Uncharacterized protein.
   
 0.621
A0A183W053
Uncharacterized protein.
   
 0.621
TRE_LOCUS10858
Uncharacterized protein.
   
 0.621
TRE_LOCUS1412
Uncharacterized protein.
   
 0.596
TRE_LOCUS4161
Uncharacterized protein.
   
 0.596
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.