STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS18253Dynein_C domain-containing protein. (89 aa)    
Predicted Functional Partners:
TRE_LOCUS6441
Uncharacterized protein.
    
 0.643
TRE_LOCUS17741
Uncharacterized protein.
    
 0.607
TRE_LOCUS6206
Uncharacterized protein.
    
 0.587
TRE_LOCUS8836
Dynein light chain.
    
 0.581
TRE_LOCUS10763
Uncharacterized protein.
    
  0.576
A0A183VKJ0
Uncharacterized protein.
   
 0.571
TRE_LOCUS10920
WD_REPEATS_REGION domain-containing protein.
   
 0.571
TRE_LOCUS13933
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.570
TRE_LOCUS15780
Dynein_C domain-containing protein.
 
     0.570
A0A183W8P8
Uncharacterized protein.
    
 0.561
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
Server load: low (22%) [HD]