STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS18554Uncharacterized protein. (144 aa)    
Predicted Functional Partners:
TRE_LOCUS3270
Diphthami_syn_2 domain-containing protein.
   
 0.991
TRE_LOCUS3968
Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.
  
 0.981
A0A183VU92
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 0.981
A0A183W2Z7
Uncharacterized protein.
  
 0.981
TRE_LOCUS9017
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
 0.981
TRE_LOCUS9385
Ribosomal_L18_c domain-containing protein.
  
 0.981
TRE_LOCUS11426
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.981
TRE_LOCUS14329
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 0.981
TRE_LOCUS15705
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.981
TRE_LOCUS17971
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
  
 0.981
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.