STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS18833Uncharacterized protein. (133 aa)    
Predicted Functional Partners:
TRE_LOCUS16352
Uncharacterized protein.
      
 0.597
TRE_LOCUS534
Peptidase_M24 domain-containing protein.
  
 
 0.566
A0A183X450
AMP_N domain-containing protein.
  
 
 0.566
A0A183XAR7
AMP_N domain-containing protein.
  
 
 0.566
A0A183WD38
Uncharacterized protein.
  
 
 0.552
TRE_LOCUS14512
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.552
A0A183WM52
C5-epim_C domain-containing protein.
      
 0.542
A0A183X4Y8
Uncharacterized protein.
      
 0.533
TRE_LOCUS4863
AMP_N domain-containing protein.
    
 0.530
TRE_LOCUS5762
Uncharacterized protein.
    
 0.530
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.