STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS19548Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
TRE_LOCUS4375
Uncharacterized protein.
   
 0.997
TRE_LOCUS3244
Uncharacterized protein.
  
 0.996
TRE_LOCUS9296
Uncharacterized protein.
    
 0.996
TRE_LOCUS9747
Uncharacterized protein.
    
 0.995
A0A183WQU8
BRO1 domain-containing protein.
    
 0.995
TRE_LOCUS14813
Uncharacterized protein.
    
 0.995
TRE_LOCUS11666
Uncharacterized protein.
    
 0.994
TRE_LOCUS4226
BRO1 domain-containing protein.
    
 0.993
TRE_LOCUS11109
BRO1 domain-containing protein.
    
 0.993
TRE_LOCUS11984
ALIX_LYPXL_bnd domain-containing protein.
    
 0.993
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.