STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H310_08547WW domain-containing protein. (1340 aa)    
Predicted Functional Partners:
H310_12239
WD_REPEATS_REGION domain-containing protein.
   
 0.651
H310_02848
Ipi1_N domain-containing protein.
    
 0.627
H310_04417
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.612
H310_02866
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
  0.586
H310_14672
Uncharacterized protein.
    
 0.573
H310_03974
60S ribosomal protein L8.
    
  0.573
H310_01060
Sushi domain-containing protein.
    
 0.573
H310_00496
Uncharacterized protein.
    
 0.573
H310_13533
CLP1_P domain-containing protein.
    
  0.564
H310_14824
Uncharacterized protein.
    
 0.563
Your Current Organism:
Aphanomyces invadans
NCBI taxonomy Id: 157072
Other names: A. invadans
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