Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ76349.1 | SDZ76373.1 | SAMN04488525_10164 | SAMN04488525_10165 | Ribonuclease BN, tRNA processing enzyme. | Lipoate-protein ligase A. | 0.746 |
SDZ76373.1 | SDZ76349.1 | SAMN04488525_10165 | SAMN04488525_10164 | Lipoate-protein ligase A. | Ribonuclease BN, tRNA processing enzyme. | 0.746 |
SDZ76373.1 | SDZ79929.1 | SAMN04488525_10165 | SAMN04488525_101205 | Lipoate-protein ligase A. | Pyruvate dehydrogenase E1 component beta subunit. | 0.905 |
SDZ76373.1 | SDZ79959.1 | SAMN04488525_10165 | SAMN04488525_101206 | Lipoate-protein ligase A. | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase). | 0.949 |
SDZ76373.1 | SDZ79979.1 | SAMN04488525_10165 | SAMN04488525_101207 | Lipoate-protein ligase A. | Dihydrolipoamide dehydrogenase. | 0.884 |
SDZ76373.1 | SEA16168.1 | SAMN04488525_10165 | SAMN04488525_102124 | Lipoate-protein ligase A. | NADPH-glutathione reductase. | 0.630 |
SDZ76373.1 | SEA49264.1 | SAMN04488525_10165 | SAMN04488525_103239 | Lipoate-protein ligase A. | NAD-dependent deacetylase. | 0.668 |
SDZ76373.1 | SEA93603.1 | SAMN04488525_10165 | SAMN04488525_11142 | Lipoate-protein ligase A. | Glycine cleavage system H protein. | 0.883 |
SDZ76373.1 | gcvH | SAMN04488525_10165 | SAMN04488525_102132 | Lipoate-protein ligase A. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.869 |
SDZ76373.1 | lipL | SAMN04488525_10165 | SAMN04488525_105127 | Lipoate-protein ligase A. | octanoyl-[GcvH]:protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.922 |
SDZ76373.1 | pdhA | SAMN04488525_10165 | SAMN04488525_101204 | Lipoate-protein ligase A. | Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.889 |
SDZ79929.1 | SDZ76373.1 | SAMN04488525_101205 | SAMN04488525_10165 | Pyruvate dehydrogenase E1 component beta subunit. | Lipoate-protein ligase A. | 0.905 |
SDZ79929.1 | SDZ79959.1 | SAMN04488525_101205 | SAMN04488525_101206 | Pyruvate dehydrogenase E1 component beta subunit. | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase). | 0.999 |
SDZ79929.1 | SDZ79979.1 | SAMN04488525_101205 | SAMN04488525_101207 | Pyruvate dehydrogenase E1 component beta subunit. | Dihydrolipoamide dehydrogenase. | 0.999 |
SDZ79929.1 | SEA16168.1 | SAMN04488525_101205 | SAMN04488525_102124 | Pyruvate dehydrogenase E1 component beta subunit. | NADPH-glutathione reductase. | 0.982 |
SDZ79929.1 | SEA93603.1 | SAMN04488525_101205 | SAMN04488525_11142 | Pyruvate dehydrogenase E1 component beta subunit. | Glycine cleavage system H protein. | 0.762 |
SDZ79929.1 | gcvH | SAMN04488525_101205 | SAMN04488525_102132 | Pyruvate dehydrogenase E1 component beta subunit. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.710 |
SDZ79929.1 | lipL | SAMN04488525_101205 | SAMN04488525_105127 | Pyruvate dehydrogenase E1 component beta subunit. | octanoyl-[GcvH]:protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.799 |
SDZ79929.1 | pdhA | SAMN04488525_101205 | SAMN04488525_101204 | Pyruvate dehydrogenase E1 component beta subunit. | Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.999 |
SDZ79959.1 | SDZ76373.1 | SAMN04488525_101206 | SAMN04488525_10165 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase). | Lipoate-protein ligase A. | 0.949 |
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