STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA20248.1Cu+-exporting ATPase. (821 aa)    
Predicted Functional Partners:
SEA20208.1
Copper chaperone CopZ.
  
 0.994
SEA98453.1
Cu+-exporting ATPase.
 
0.982
SEA20289.1
Copper transport repressor, CopY/TcrY family.
  
  
 0.922
SEA98411.1
Copper chaperone CopZ.
 
 0.798
SEA91047.1
Multicopper oxidases signature 2; Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
 0.784
SEA98054.1
Cd2+/Zn2+-exporting ATPase.
 
0.782
SEA97732.1
Cd2+/Zn2+-exporting ATPase.
 
0.781
SEA48606.1
Cd2+/Zn2+-exporting ATPase.
 
0.780
SEA13554.1
Cd2+/Zn2+-exporting ATPase.
 
0.778
SEA68881.1
Copper ion binding protein.
  
 0.769
Your Current Organism:
Trichococcus collinsii
NCBI taxonomy Id: 157076
Other names: ATCC BAA-296, DSM 14526, T. collinsii, Trichococcus collinsii Liu et al. 2002 emend. Pikuta et al. 2006, strain 37AN3, strain 37AN3*
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.