Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEA49774.1 | SEA49809.1 | SAMN04488525_103255 | SAMN04488525_103256 | Methyl-accepting chemotaxis protein. | Purine-binding chemotaxis protein CheW. | 0.997 |
SEA49774.1 | SEA49933.1 | SAMN04488525_103255 | SAMN04488525_103259 | Methyl-accepting chemotaxis protein. | Chemotaxis protein methyltransferase CheR. | 0.992 |
SEA49774.1 | SEA49970.1 | SAMN04488525_103255 | SAMN04488525_103260 | Methyl-accepting chemotaxis protein. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.998 |
SEA49774.1 | SEA50003.1 | SAMN04488525_103255 | SAMN04488525_103261 | Methyl-accepting chemotaxis protein. | Chemotaxis protein CheC. | 0.895 |
SEA49774.1 | SEA50088.1 | SAMN04488525_103255 | SAMN04488525_103263 | Methyl-accepting chemotaxis protein. | Purine-binding chemotaxis protein CheW. | 0.997 |
SEA49774.1 | SEA50125.1 | SAMN04488525_103255 | SAMN04488525_103264 | Methyl-accepting chemotaxis protein. | Flagellar motor switch protein FliM. | 0.803 |
SEA49774.1 | SEA50165.1 | SAMN04488525_103255 | SAMN04488525_103265 | Methyl-accepting chemotaxis protein. | Flagellar motor switch protein FliN/FliY. | 0.959 |
SEA49774.1 | cheB | SAMN04488525_103255 | SAMN04488525_103258 | Methyl-accepting chemotaxis protein. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.991 |
SEA49774.1 | cheD | SAMN04488525_103255 | SAMN04488525_103257 | Methyl-accepting chemotaxis protein. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.981 |
SEA49809.1 | SEA49774.1 | SAMN04488525_103256 | SAMN04488525_103255 | Purine-binding chemotaxis protein CheW. | Methyl-accepting chemotaxis protein. | 0.997 |
SEA49809.1 | SEA49933.1 | SAMN04488525_103256 | SAMN04488525_103259 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein methyltransferase CheR. | 0.987 |
SEA49809.1 | SEA49970.1 | SAMN04488525_103256 | SAMN04488525_103260 | Purine-binding chemotaxis protein CheW. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.999 |
SEA49809.1 | SEA50003.1 | SAMN04488525_103256 | SAMN04488525_103261 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein CheC. | 0.978 |
SEA49809.1 | SEA50088.1 | SAMN04488525_103256 | SAMN04488525_103263 | Purine-binding chemotaxis protein CheW. | Purine-binding chemotaxis protein CheW. | 0.947 |
SEA49809.1 | SEA50125.1 | SAMN04488525_103256 | SAMN04488525_103264 | Purine-binding chemotaxis protein CheW. | Flagellar motor switch protein FliM. | 0.934 |
SEA49809.1 | SEA50165.1 | SAMN04488525_103256 | SAMN04488525_103265 | Purine-binding chemotaxis protein CheW. | Flagellar motor switch protein FliN/FliY. | 0.999 |
SEA49809.1 | SEA51500.1 | SAMN04488525_103256 | SAMN04488525_103304 | Purine-binding chemotaxis protein CheW. | Methyl-accepting chemotaxis protein. | 0.996 |
SEA49809.1 | cheB | SAMN04488525_103256 | SAMN04488525_103258 | Purine-binding chemotaxis protein CheW. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
SEA49809.1 | cheD | SAMN04488525_103256 | SAMN04488525_103257 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.974 |
SEA49933.1 | SEA49774.1 | SAMN04488525_103259 | SAMN04488525_103255 | Chemotaxis protein methyltransferase CheR. | Methyl-accepting chemotaxis protein. | 0.992 |
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