STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF16305.1MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; Derived by automated computational analysis using gene prediction method: Protein Homology. (785 aa)    
Predicted Functional Partners:
ARF16306.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.932
ARF18406.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.764
ARF18738.1
30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.761
ARF16304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.722
ARF16355.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.722
ARF18523.1
DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.721
ARF16345.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.713
rpmI
50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.713
ARF17492.1
50S ribosomal protein L9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.697
ARF16393.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.696
Your Current Organism:
Sporosarcina ureae
NCBI taxonomy Id: 1571
Other names: ATCC 6473, DSM 2281, IFO 12699, JCM 2577, LMG 17366, LMG:17366, NBRC 12699, Planosarcina ureae, S. ureae, Sarcina ureae, VKM B-595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.