STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF18825.1Catalase HPII; Derived by automated computational analysis using gene prediction method: Protein Homology. (683 aa)    
Predicted Functional Partners:
ARF15841.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.607
ARF16917.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.607
ARF17817.1
Peroxiredoxin; With AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.604
ARF18317.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.604
ARF18843.1
Peptide methionine sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.589
ARF15985.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.565
ARF15986.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.565
ARF16360.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.565
ARF16674.1
Glutathione-dependent formaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.550
ARF18527.1
RNA chaperone Hfq; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.519
Your Current Organism:
Sporosarcina ureae
NCBI taxonomy Id: 1571
Other names: ATCC 6473, DSM 2281, IFO 12699, JCM 2577, LMG 17366, LMG:17366, NBRC 12699, Planosarcina ureae, S. ureae, Sarcina ureae, VKM B-595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.