STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF17229.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)    
Predicted Functional Partners:
ARF17228.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.961
ARF17227.1
Phosphoglucosamine mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.935
ARF16305.1
MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.630
ARF15898.1
Regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.608
ARF17230.1
Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.571
ARF17231.1
RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: this protein is involved in detoxification and protection against antimicrobial; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.487
ARF16663.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.452
ARF18743.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.441
ARF17226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.409
Your Current Organism:
Sporosarcina ureae
NCBI taxonomy Id: 1571
Other names: ATCC 6473, DSM 2281, IFO 12699, JCM 2577, LMG 17366, LMG:17366, NBRC 12699, Planosarcina ureae, S. ureae, Sarcina ureae, VKM B-595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.