STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF17244.1Urease accessory protein UreG; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)    
Predicted Functional Partners:
ARF17245.1
Urease accessory protein UreF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
ARF17243.1
Urease accessory protein UreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
ureE
Urease accessory protein UreE; Involved in the assembly of the urease metallocenter; possible nickel donor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
ureC
Urease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.984
ARF17248.1
Urease subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
ARF17249.1
Urease subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.980
ARF18807.1
Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.581
ARF18768.1
Urea transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.550
ARF17556.1
methionine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.422
ARF16663.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.417
Your Current Organism:
Sporosarcina ureae
NCBI taxonomy Id: 1571
Other names: ATCC 6473, DSM 2281, IFO 12699, JCM 2577, LMG 17366, LMG:17366, NBRC 12699, Planosarcina ureae, S. ureae, Sarcina ureae, VKM B-595
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