STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF17368.1Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
ARF15832.1
Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
ARF16913.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
ARF17031.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
ARF17367.1
Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
ARF17369.1
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
ARF18319.1
Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.999
ARF15947.1
Cystine transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.994
ARF16757.1
Manganese ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.988
SporoP17a_00670
Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.987
ARF17903.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.975
Your Current Organism:
Sporosarcina ureae
NCBI taxonomy Id: 1571
Other names: ATCC 6473, DSM 2281, IFO 12699, JCM 2577, LMG 17366, LMG:17366, NBRC 12699, Planosarcina ureae, S. ureae, Sarcina ureae, VKM B-595
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