STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF17797.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (261 aa)    
Predicted Functional Partners:
ARF17264.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.865
rpsP
30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.862
ARF18494.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.858
ARF17278.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.857
ARF17497.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.842
ARF18477.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.839
ARF17299.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.838
ARF17286.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.833
ARF17281.1
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.825
ARF15987.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.821
Your Current Organism:
Sporosarcina ureae
NCBI taxonomy Id: 1571
Other names: ATCC 6473, DSM 2281, IFO 12699, JCM 2577, LMG 17366, LMG:17366, NBRC 12699, Planosarcina ureae, S. ureae, Sarcina ureae, VKM B-595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.