STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF18300.1Cadmium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (700 aa)    
Predicted Functional Partners:
ARF17192.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.763
ARF17176.1
Copper resistance protein CopZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.627
ARF18826.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.587
ARF17741.1
Heavy metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.583
ARF16817.1
Copper resistance protein CopZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.576
ARF18949.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.525
ARF18948.1
RNA pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.449
ARF16543.1
Cation diffusion facilitator family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.444
ARF16523.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.438
ARF16695.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.414
Your Current Organism:
Sporosarcina ureae
NCBI taxonomy Id: 1571
Other names: ATCC 6473, DSM 2281, IFO 12699, JCM 2577, LMG 17366, LMG:17366, NBRC 12699, Planosarcina ureae, S. ureae, Sarcina ureae, VKM B-595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.