STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001922575_00031Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_001922575_00756
Unannotated protein.
 
 0.996
GCA_001922575_02392
Unannotated protein.
 
 0.993
GCA_001922575_01301
Unannotated protein.
 
 
 0.981
GCA_001922575_02899
Unannotated protein.
    
 0.961
GCA_001922575_00660
Unannotated protein.
  
 
 0.939
GCA_001922575_01297
Unannotated protein.
    
 0.929
GCA_001922575_01627
Unannotated protein.
  
 
 0.918
GCA_001922575_00235
Unannotated protein.
     
 0.910
GCA_001922575_00686
Unannotated protein.
  
 
 0.901
GCA_001922575_02669
Unannotated protein.
    
 0.882
Your Current Organism:
Neptunomonas phycophila
NCBI taxonomy Id: 1572645
Other names: CECT 8716, LMG 28329, LMG:28329, N. phycophila, Neptunomonas phycophila Frommlet et al. 2015 emend. Dieguez et al. 2017, Neptunomonas sp. SYM1, bacterium Scap09, strain SYM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.