STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001922575_00421Unannotated protein. (574 aa)    
Predicted Functional Partners:
GCA_001922575_00424
Unannotated protein.
 
 
 0.999
GCA_001922575_00423
Unannotated protein.
 
 
 0.990
GCA_001922575_00419
Unannotated protein.
 
 
 0.981
GCA_001922575_00418
Unannotated protein.
 
  
 0.978
GCA_001922575_00437
Unannotated protein.
 
  
 0.968
GCA_001922575_00410
Unannotated protein.
 
  
 0.966
GCA_001922575_00439
Unannotated protein.
 
 
 0.965
GCA_001922575_00412
Unannotated protein.
 
  
 0.962
GCA_001922575_00414
Unannotated protein.
 
 
 0.962
GCA_001922575_00444
Unannotated protein.
 
 
 0.959
Your Current Organism:
Neptunomonas phycophila
NCBI taxonomy Id: 1572645
Other names: CECT 8716, LMG 28329, LMG:28329, N. phycophila, Neptunomonas phycophila Frommlet et al. 2015 emend. Dieguez et al. 2017, Neptunomonas sp. SYM1, bacterium Scap09, strain SYM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.