STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001922575_03374Unannotated protein. (405 aa)    
Predicted Functional Partners:
GCA_001922575_00507
Unannotated protein.
  
0.998
GCA_001922575_01675
Unannotated protein.
 0.988
GCA_001922575_03375
Unannotated protein.
 
 0.982
GCA_001922575_01423
Unannotated protein.
 0.973
GCA_001922575_02779
Unannotated protein.
 
 
 0.972
GCA_001922575_01370
Unannotated protein.
 
 
 0.951
GCA_001922575_01673
Unannotated protein.
 
 0.938
GCA_001922575_00347
Unannotated protein.
 
 0.933
GCA_001922575_01542
Unannotated protein.
  
 
 0.907
GCA_001922575_00328
Unannotated protein.
  
  
 
0.891
Your Current Organism:
Neptunomonas phycophila
NCBI taxonomy Id: 1572645
Other names: CECT 8716, LMG 28329, LMG:28329, N. phycophila, Neptunomonas phycophila Frommlet et al. 2015 emend. Dieguez et al. 2017, Neptunomonas sp. SYM1, bacterium Scap09, strain SYM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.