STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CI238_13535Initiation-specific alpha--mannosyltransferase. (162 aa)    
Predicted Functional Partners:
CI238_04993
Nuclear pore glycoprotein p62.
    
 0.828
CI238_01704
Wd domain-containing protein.
    
 0.552
CI238_08095
SPRY domain-containing protein.
    
 0.547
CI238_01420
Uba ts-n domain-containing protein.
    
  0.546
CI238_00990
Serine threonine protein kinase.
    
 0.521
CI238_05326
Nuclear pore complex subunit protein.
    
  0.517
CI238_11788
Protein transport protein sec13; Belongs to the WD repeat SEC13 family.
    
 0.515
CI238_08191
Nuclear pore protein; Belongs to the WD repeat SEC13 family.
    
  0.513
CI238_02136
Serine threonine-protein kinase.
    
 0.510
CI238_08250
Ring u-box.
    
  0.510
Your Current Organism:
Colletotrichum incanum
NCBI taxonomy Id: 1573173
Other names: BPI 884116, C. incanum, CBS 133485, Colletotrichum incanum H.-C. Yang, J. S. Haudenshield, & G. L. Hartman, 2014, Colletotrichum sp. HCY-2012, IL6A, IL:6A, NRRL 62592
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.