STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CI238_05363T5orf172 domain-containing protein. (400 aa)    
Predicted Functional Partners:
CI238_05015
Lipid acyl hydrolase.
    
 0.992
CI238_03376
Antiviral protein.
    
 0.794
CI238_07686
Dshct domain-containing protein.
    
 0.791
CI238_11707
Cdc73 family rna pol ii accessory factor.
    
 0.763
CI238_00983
Rna polymerase ii transcription elongation factor.
    
 0.715
CI238_04062
Uncharacterized protein.
    
 0.683
CI238_03585
Ubiquitin-conjugating enzyme.
    
  0.669
CI238_03769
Elongation factor tu gtp binding domain-containing protein.
    
 0.642
CI238_01306
Cpsf a subunit region.
    
  0.628
CI238_04993
Nuclear pore glycoprotein p62.
    
  0.626
Your Current Organism:
Colletotrichum incanum
NCBI taxonomy Id: 1573173
Other names: BPI 884116, C. incanum, CBS 133485, Colletotrichum incanum H.-C. Yang, J. S. Haudenshield, & G. L. Hartman, 2014, Colletotrichum sp. HCY-2012, IL6A, IL:6A, NRRL 62592
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.