STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXT48045.1KEGG: amu:Amuc_2167 0. oligopeptidase A K01414; Psort location: Cytoplasmic, score: 9.97. (698 aa)    
Predicted Functional Partners:
KXT48044.1
Oxidoreductase, NAD-binding domain protein; KEGG: mgr:MGG_13811 7.1e-23 hypothetical protein; K00540; Psort location: Cytoplasmic, score: 8.96.
  
    0.705
KXT48046.1
Tetratricopeptide repeat protein.
       0.686
KXT48047.1
arginine--tRNA ligase; KEGG: amu:Amuc_2169 5.0e-301 arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 9.97.
       0.646
KXT48048.1
Hypothetical protein.
       0.472
Your Current Organism:
Akkermansia sp. KLE1797
NCBI taxonomy Id: 1574264
Other names: A. sp. KLE1797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.