STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FFIC_140740Unannotated protein. (384 aa)    
Predicted Functional Partners:
FFIC_240320
Unannotated protein.
  
     0.716
FFIC_231450
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.470
FFIC_140730
Unannotated protein.
 
    
0.418
FFIC_230120
Unannotated protein.
  
     0.415
FFIC_080210
Unannotated protein; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
 
     0.412
FFIC_285540
Unannotated protein; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
 
     0.408
Your Current Organism:
Fructobacillus ficulneus
NCBI taxonomy Id: 157463
Other names: DSM 13613, F. ficulneus, Fructobacillus ficulneus (Antunes et al. 2002) Endo and Okada 2008, JCM 12225, Leuconostoc ficulneum, Leuconostoc ficulneum Antunes et al. 2002, Leuconostoc ficulneus, NRRL B-23447, strain FS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.