STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FFIC_230360Unannotated protein. (359 aa)    
Predicted Functional Partners:
FFIC_230350
Unannotated protein.
 
  
0.994
FFIC_230390
Unannotated protein.
    
  0.984
FFIC_150030
Unannotated protein.
    
  0.949
mprF
Unannotated protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
  
 
 0.853
FFIC_281200
Unannotated protein.
 
 
 
 0.815
FFIC_281190
Unannotated protein.
   
 
 0.779
FFIC_230380
Unannotated protein.
 
     0.777
FFIC_230330
Unannotated protein.
  
 0.641
FFIC_230340
Unannotated protein.
  
 0.641
polA
Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 
 0.640
Your Current Organism:
Fructobacillus ficulneus
NCBI taxonomy Id: 157463
Other names: DSM 13613, F. ficulneus, Fructobacillus ficulneus (Antunes et al. 2002) Endo and Okada 2008, JCM 12225, Leuconostoc ficulneum, Leuconostoc ficulneum Antunes et al. 2002, Leuconostoc ficulneus, NRRL B-23447, strain FS-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.