STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FFIC_231950Unannotated protein. (186 aa)    
Predicted Functional Partners:
coaD
Unannotated protein.
 
  
 0.931
FFIC_231940
Unannotated protein.
  
    0.877
FFIC_231930
Unannotated protein; Belongs to the SEDS family.
  
    0.835
FFIC_231920
Unannotated protein.
       0.785
FFIC_281100
Unannotated protein.
  
    0.598
FFIC_280810
Unannotated protein.
       0.588
hisG
Unannotated protein; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.
       0.549
celA2
Unannotated protein.
       0.528
FFIC_280790
Unannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
 
     0.507
rlmH
Unannotated protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
 
   
 0.502
Your Current Organism:
Fructobacillus ficulneus
NCBI taxonomy Id: 157463
Other names: DSM 13613, F. ficulneus, Fructobacillus ficulneus (Antunes et al. 2002) Endo and Okada 2008, JCM 12225, Leuconostoc ficulneum, Leuconostoc ficulneum Antunes et al. 2002, Leuconostoc ficulneus, NRRL B-23447, strain FS-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.