STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cspRUnannotated protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. (170 aa)    
Predicted Functional Partners:
FFIC_285560
Unannotated protein.
       0.818
FFIC_285570
Unannotated protein.
       0.538
FFIC_281510
Unannotated protein.
     
 0.490
Your Current Organism:
Fructobacillus ficulneus
NCBI taxonomy Id: 157463
Other names: DSM 13613, F. ficulneus, Fructobacillus ficulneus (Antunes et al. 2002) Endo and Okada 2008, JCM 12225, Leuconostoc ficulneum, Leuconostoc ficulneum Antunes et al. 2002, Leuconostoc ficulneus, NRRL B-23447, strain FS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.