Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FFIC_240640 | FFIC_283920 | GCA_001047075_00702 | GCA_001047075_01264 | Unannotated protein. | Unannotated protein. | 0.730 |
FFIC_240640 | FFIC_286020 | GCA_001047075_00702 | GCA_001047075_01463 | Unannotated protein. | Unannotated protein. | 0.467 |
FFIC_283920 | FFIC_240640 | GCA_001047075_01264 | GCA_001047075_00702 | Unannotated protein. | Unannotated protein. | 0.730 |
FFIC_283920 | FFIC_286020 | GCA_001047075_01264 | GCA_001047075_01463 | Unannotated protein. | Unannotated protein. | 0.621 |
FFIC_283920 | rnc | GCA_001047075_01264 | GCA_001047075_01459 | Unannotated protein. | Unannotated protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.475 |
FFIC_286000 | FFIC_286020 | GCA_001047075_01461 | GCA_001047075_01463 | Unannotated protein. | Unannotated protein. | 0.831 |
FFIC_286000 | FFIC_286040 | GCA_001047075_01461 | GCA_001047075_01465 | Unannotated protein. | Unannotated protein. | 0.475 |
FFIC_286000 | dacA | GCA_001047075_01461 | GCA_001047075_01462 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.953 |
FFIC_286000 | glmM | GCA_001047075_01461 | GCA_001047075_01460 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.714 |
FFIC_286000 | murB | GCA_001047075_01461 | GCA_001047075_01464 | Unannotated protein. | Unannotated protein; Cell wall formation. | 0.828 |
FFIC_286000 | mutL | GCA_001047075_01461 | GCA_001047075_01466 | Unannotated protein. | Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.443 |
FFIC_286000 | rnc | GCA_001047075_01461 | GCA_001047075_01459 | Unannotated protein. | Unannotated protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.418 |
FFIC_286020 | FFIC_240640 | GCA_001047075_01463 | GCA_001047075_00702 | Unannotated protein. | Unannotated protein. | 0.467 |
FFIC_286020 | FFIC_283920 | GCA_001047075_01463 | GCA_001047075_01264 | Unannotated protein. | Unannotated protein. | 0.621 |
FFIC_286020 | FFIC_286000 | GCA_001047075_01463 | GCA_001047075_01461 | Unannotated protein. | Unannotated protein. | 0.831 |
FFIC_286020 | FFIC_286040 | GCA_001047075_01463 | GCA_001047075_01465 | Unannotated protein. | Unannotated protein. | 0.475 |
FFIC_286020 | dacA | GCA_001047075_01463 | GCA_001047075_01462 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.831 |
FFIC_286020 | glmM | GCA_001047075_01463 | GCA_001047075_01460 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.641 |
FFIC_286020 | murB | GCA_001047075_01463 | GCA_001047075_01464 | Unannotated protein. | Unannotated protein; Cell wall formation. | 0.830 |
FFIC_286020 | mutL | GCA_001047075_01463 | GCA_001047075_01466 | Unannotated protein. | Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.444 |
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