STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FFIC_286040Unannotated protein. (162 aa)    
Predicted Functional Partners:
mutL
Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
       0.720
FFIC_282610
Unannotated protein; Belongs to the CvfB family.
 
     0.513
FFIC_286000
Unannotated protein.
       0.475
dacA
Unannotated protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.475
FFIC_286020
Unannotated protein.
       0.475
murB
Unannotated protein; Cell wall formation.
       0.475
sip3
Unannotated protein; Belongs to the peptidase S26 family.
   
    0.405
Your Current Organism:
Fructobacillus ficulneus
NCBI taxonomy Id: 157463
Other names: DSM 13613, F. ficulneus, Fructobacillus ficulneus (Antunes et al. 2002) Endo and Okada 2008, JCM 12225, Leuconostoc ficulneum, Leuconostoc ficulneum Antunes et al. 2002, Leuconostoc ficulneus, NRRL B-23447, strain FS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.