STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH62702.1Alpha-amylase/alpha-mannosidase, GH57 family. (728 aa)    
Predicted Functional Partners:
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  0.904
SFH70965.1
UDPglucose--hexose-1-phosphate uridylyltransferase.
     0.840
SFI78456.1
Alpha-amylase.
  
     0.603
SFI67256.1
Starch phosphorylase.
 
 
 0.586
SFH74071.1
Hypothetical protein.
  
     0.546
SFI14560.1
(1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase.
 
  
  0.437
SFH69637.1
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
  
     0.425
SFH82489.1
Amylosucrase/maltose alpha-D-glucosyltransferase/ alpha-amylase.
    
 0.421
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.