STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH80180.1Capsid protein. (454 aa)    
Predicted Functional Partners:
SFH85215.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
 
    0.796
SFI57073.1
Glycosyl transferases group 1.
  
     0.774
SFI57585.1
Hypothetical protein.
  
     0.771
SFI34943.1
ASCH domain-containing protein.
  
     0.749
SFJ48604.1
Alkyl hydroperoxide reductase subunit D; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.669
SFI24819.1
Putative heme-binding domain-containing protein.
  
     0.641
SFJ02454.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.627
SFH61063.1
Hypothetical protein.
  
     0.568
SFH85326.1
Chromosome segregation protein Spo0J, contains ParB-like nuclease domain.
 
    0.530
SFI23595.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
     0.523
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
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