STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH80239.1Trehalose utilisation. (339 aa)    
Predicted Functional Partners:
SFI82156.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
  
  0.975
SFH93669.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
  
  0.794
SFI49237.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
  
  0.782
SFI43877.1
Putative heme-binding domain-containing protein.
  
  
  0.779
SFI81381.1
Putative heme-binding domain-containing protein.
  
  
  0.779
SFI19083.1
Xylose isomerase-like TIM barrel.
  
     0.771
SFH80268.1
Hypothetical protein.
 
    0.764
SFI29533.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
     0.764
SFI53515.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
  
  0.759
SFI29214.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
  
  0.757
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.