STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI00033.1Glycosyltransferase involved in cell wall bisynthesis. (430 aa)    
Predicted Functional Partners:
SFI66116.1
Outer membrane protein assembly factor BamB.
  
     0.768
SFJ31444.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
  
     0.768
SFI05655.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
  
     0.766
SFI63384.1
Outer membrane protein assembly factor BamB.
  
     0.766
SFH62119.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
  
     0.764
SFI59408.1
Hypothetical protein.
  
     0.764
SFJ18934.1
ABC-type antimicrobial peptide transport system, permease component.
 
     0.763
SFI85769.1
Hypothetical protein.
  
     0.762
SFH60532.1
Hypothetical protein.
  
     0.761
SFI75714.1
Hypothetical protein.
  
     0.761
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.