STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI04461.1PAS domain S-box-containing protein. (966 aa)    
Predicted Functional Partners:
SFH57727.1
Hypothetical protein/two-component system, chemotaxis family, CheB/CheR fusion protein.
 
0.999
SFH70854.1
PAS domain S-box-containing protein.
 
0.999
SFH73520.1
PAS domain S-box-containing protein.
 
0.999
SFH74527.1
Methyl-accepting chemotaxis protein.
 
 0.999
SFH75203.1
PAS fold-containing protein.
 
0.999
SFI01055.1
Hypothetical protein/two-component system, chemotaxis family, CheB/CheR fusion protein.
0.999
SFH94499.1
PAS domain S-box-containing protein.
 
0.999
SFI08254.1
Hypothetical protein.
 
0.999
SFI26273.1
PAS domain S-box-containing protein.
 
0.999
SFI30003.1
Two-component system, unclassified family, sensor kinase.
 
0.999
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.