STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI08044.1Polysaccharide deacetylase. (346 aa)    
Predicted Functional Partners:
SFI27201.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
 
 0.888
SFI39860.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.760
SFJ48391.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.760
SFJ62785.1
Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family.
 
     0.565
SFH71641.1
Glycosyltransferase involved in cell wall bisynthesis.
     0.553
SFI08070.1
Hypothetical protein.
       0.531
SFJ60962.1
Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family.
 
     0.520
SFH71593.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
   
 0.445
SFH71618.1
Acetyltransferase (GNAT) domain-containing protein.
 
     0.440
SFH71708.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.425
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.