Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI33798.1 | SFI33826.1 | SAMN05421753_10818 | SAMN05421753_10819 | Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase. | DNA gyrase subunit B/topoisomerase-4 subunit B. | 0.538 |
SFI33798.1 | SFI33866.1 | SAMN05421753_10818 | SAMN05421753_10820 | Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase. | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | 0.404 |
SFI33826.1 | SFI33798.1 | SAMN05421753_10819 | SAMN05421753_10818 | DNA gyrase subunit B/topoisomerase-4 subunit B. | Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase. | 0.538 |
SFI33826.1 | SFI33866.1 | SAMN05421753_10819 | SAMN05421753_10820 | DNA gyrase subunit B/topoisomerase-4 subunit B. | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | 0.572 |
SFI33866.1 | SFI33798.1 | SAMN05421753_10820 | SAMN05421753_10818 | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase. | 0.404 |
SFI33866.1 | SFI33826.1 | SAMN05421753_10820 | SAMN05421753_10819 | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | DNA gyrase subunit B/topoisomerase-4 subunit B. | 0.572 |
SFI33866.1 | SFI33892.1 | SAMN05421753_10820 | SAMN05421753_10821 | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | Hypothetical protein. | 0.490 |
SFI33866.1 | SFJ33594.1 | SAMN05421753_10820 | SAMN05421753_118100 | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | SOS response associated peptidase (SRAP); Belongs to the SOS response-associated peptidase family. | 0.761 |
SFI33892.1 | SFI33866.1 | SAMN05421753_10821 | SAMN05421753_10820 | Hypothetical protein. | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | 0.490 |
SFJ33594.1 | SFI33866.1 | SAMN05421753_118100 | SAMN05421753_10820 | SOS response associated peptidase (SRAP); Belongs to the SOS response-associated peptidase family. | Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. | 0.761 |