STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI44705.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
SFH61343.1
Uncharacterized conserved protein, DUF1778 family.
   
   0.875
SFI34037.1
Hypothetical protein.
  
     0.674
SFI97597.1
HD domain-containing protein.
  
 
   0.599
SFI77282.1
Protein of unknown function.
  
     0.527
SFI74789.1
RNA polymerase primary sigma factor; Belongs to the sigma-70 factor family.
  
    0.484
SFH68640.1
Spore coat protein CotH.
  
     0.480
SFI19952.1
Glucuronate isomerase.
  
     0.458
SFI44733.1
Na+/alanine symporter.
       0.448
SFI89901.1
YXWGXW repeat-containing protein.
  
     0.446
SFJ67230.1
Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
     0.413
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.